基于SVR和k-近邻群的组合预测在QSAR中的应用

为提高定量构效关系(QSAR)研究的预测精度,发展了一种新的基于支持向量机回归(SVR)非线性筛选分子结构描述符、基于k-近邻群的非线性组合预测方法.首先以均方误差(MSE)最小为原则,以留一法通过多轮末尾淘汰实施分子结构描述符的非线性SVR汰选并给出最优核函数和相应保留描述符;其次基于待测样本与训练样本保留描述符向量的欧氏距离,以不同k-近邻群子模型双重留一法预测值反映样本集的异质性;然后基于MSE最小,以留一法通过多轮末尾淘汰实施近邻群子模型的非线性SVR汰选并给出最优核函数和相应保留子模型;最后基于保留子模型以双重留一法实施组合预测.以取代苯胺和苯酚类化合物对大型溞的QSAR实例验证表明:新方法在所有参比模型中预测精度最高,且能更精细地反映描述符与化合物毒性间的非线性关系,具结构风险最小、非线性、适于小样本,能有效克服过拟合、维数灾和局极小,非线性筛选描述符和子模型,非线性组合预测,自动选择最优核函数及其相应参数,泛化推广能力优异、预测精度高等诸多优点,在QSAR研究中有广泛应用前景.     

呋喃-乙酸分子间相互作用的量子化学研究

用密度泛函理论B3LYP方法选取6-311＋＋G(d,p)基组对呋喃-乙酸复合物进行了量子化学计算研究, 通过在相同水平下的频率振动分析发现了该势能面上6个极小值点, 其最稳定构型对应一强O…H—O型氢键, 其结合能在消除基组重叠误差后为－20.87 kJ•mol^－1. 通过自然键轨道(NBO)分析, 研究了电荷转移及轨道相互作用. 通过自洽反应场(SCRF)理论中的Onsager 溶剂模型在介电常数分别为1.0, 2.247, 4.9, 7.58, 10.36, 20.7, 32.63, 38.2, 46.7, 78.39的不同溶剂环境下重新优化呋喃与乙酸势能面上最稳定构型A, 研究了溶剂对呋喃-乙酸复合物几何构型、电荷分布、偶极矩以及结合能的影响. 发现溶剂化作用增大了呋喃与乙酸分子间的结合能, 导致O…H距离减小, H—O振动频率红移. 当溶液介电常数在1.0～32.63范围时, 溶剂效应十分显著, 当介电常数大于32.63后, 溶剂化作用几乎达到了极限.     

Importance of the choice of assumptions and models in the estimation of analytical quality specifications

The validity of any model depends on its ability to imagine the situation or problem to which it is applied. Further, the assumptions made in relation to the model are determining for the actual outcome. Within the field of clinical biochemistry a lot of models for analytical quality specifications, based on a variety of concepts and ’clinical settings’, have been proposed. A hierarchical structure for application of these approaches and models has been agreed on at several occasions in 1999. In this hierarchy, the highest rank is given to evaluation of analytical quality specifications based on ’clinical settings’/’clinical outcome’ models, followed by specifications based on biological variation and on ’clinicians opinions’. This contribution, deals with the problems of combining random and systematic errors and the implications of application of different models to a variety of clinical settings. Received: 1 June, 2002 Accepted: 17 July 2002 Presented at the European Conference on Quality in the Spotlight in Medical Laboratories, 7–9 October 2001, Antwerp, Belgium     

曲率流的参数化有限元逼近

许多物理现象可以在数学上描述为受曲率驱动的自由界面运动,例如薄膜和泡沫的演变、晶体生长,等等.这些薄膜和界面的运动常依赖于其表面曲率,从而可以用相应的曲率流来描述,其相关自由界面问题的数值计算和误差分析一直是计算数学领域中的难点.参数化有限元法是曲率流的一类有效计算方法,已经能够成功模拟一些曲面在几类基本的曲率流下的演化过程.本文重点讨论曲率流的参数化有限元逼近,它的产生、发展和当前的一些挑战.     

Elliptic Reconstruction and a Posteriori Error Estimates for Fully Discrete Semilinear Parabolic Optimal Control Problems

This article studies a posteriori error analysis of fully discrete finite element approximations for semilinear parabolic optimal control problems. Based on elliptic reconstruction approach introduced earlier by Makridakis and Nochetto [25], a residual based a posteriori error estimators for the state, co-state and control variables are derived. The space discretization of the state and co-state variables is done by using the piecewise linear and continuous finite elements, whereas the piecewise constant functions are employed for the control variable. The temporal discretization is based on the backward Euler method. We derive a posteriori error estimates for the state, co-state and control variables in the $L^\infty(0,T;L^2(\Omega))$-norm. Finally, a numerical experiment is performed to illustrate the performance of the derived estimators.     

Schrödinger方程的连续时空有限元方法

本文讨论Schr?dinger方程的连续时空有限元方法,通过引入相应的时空投影算子,利用实部虚部分离技巧,得到了变量u在时间节点处的L²范数,以及u和u_t的全局L²(H¹)和L²(L²)范数意义下的最优误差估计结果.该文的结论对进一步探索和设计Schr?dinger方程的数值算法是有益的.     

Estimation of a quantile in some nonstandard cases

A necessary condition for the asymptotic normality of the sample quantile estimator isf(Q(p))=F(Q(p))>0, whereQ(p) is thep-th quantile of the distribution functionF(x). In this paper, we estimate a quantile by a kernel quantile estimator when this condition is violated. We have shown that the kernel quantile estimator is asymptotically normal in some nonstandard cases. The optimal convergence rate of the mean squared error for the kernel estimator is obtained with respect to the asymptotically optimal bandwidth. A law of the iterated logarithm is also established.This research was partially supported by the new faculty award from the University of Oregon.     

A priori error estimates for numerical methods for scalar conservation laws. Part I: The general approach

In this paper, we construct a general theory of a priori error estimates for scalar conservation laws by suitably modifying the original Kuznetsov approximation theory. As a first application of this general technique, we show that error estimates for conservation laws can be obtained without having to use explicitly any regularity properties of the approximate solution. Thus, we obtain optimal error estimates for the Engquist-Osher scheme without using the fact (i) that the solution is uniformly bounded, (ii) that the scheme is total variation diminishing, and (iii) that the discrete semigroup associated with the scheme has the -contraction property, which guarantees an upper bound for the modulus of continuity in time of the approximate solution.

     

Optimal error estimates of a locally one-dimensional method for the multidimensional heat equation

For the multidimensional heat equation in a parallelepiped, optimal error estimates inL ₂(Q) are derived. The error is of the order of +¦h¦² for any right-hand sidef L ₂(Q) and any initial function ; for appropriate classes of less regularf andu ₀, the error is of the order of ((+¦h¦² ), 1/2<1.Translated fromMatematicheskie Zametki, Vol. 60, No. 2, pp. 185–197, August, 1996.     

Error estimation in peak‐shape analysis of XPS core‐level spectra using UNIFIT 2003: how significant are the results of peak fits?

An error analysis for numerically evaluating random uncertainties in x‐ray photoelectron spectroscopy has been implemented in version 2003 of the spectra treatment and analysis software UNIFIT in order to improve the understanding of the statistical basis and the reliability of the model parameters for photoelectron spectra. The theoretical basis as well as two approaches to obtain error limits of the fit parameters have been considered. Several test spectra have been analysed and discussed. A representative example has been chosen to demonstrate the relevance of the error estimation for practical surface analysis. Suggestions for the minimization of errors in the peak‐fitting procedures are presented. Copyright © 2004 John Wiley & Sons, Ltd.